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“headline”: “SOP for TMF Setup (Paper/eTMF) and Structure”,
“description”: “This SOP establishes standardized processes for setting up Trial Master Files (TMF), both paper and electronic (eTMF), ensuring compliance with ICH GCP, FDA, EMA, CDSCO, and WHO requirements for clinical trial documentation structure, indexing, and inspection readiness.”,
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Published on 23/12/2025
Standard Operating Procedure for TMF Setup (Paper/eTMF) and Structure
| SOP No. | CR/OPS/074/2025 |
| Supersedes | NA |
| Page No. | 1 of 36 |
| Issue Date | 26/08/2025 |
| Effective Date | 01/09/2025 |
| Review Date | 01/09/2026 |
Purpose
The purpose of this SOP is to describe the standardized setup, structure, and maintenance of the Trial Master File (TMF), whether maintained in paper
Scope
This SOP applies to sponsors, CROs, investigator sites, and QA staff responsible for establishing, maintaining, and overseeing TMF/eTMF systems. It covers setup, indexing, placeholders, document classification, version control, user access, quality checks, and inspection readiness across all clinical trials.
Responsibilities
- Sponsor: Ensures TMF/eTMF is established, structured, and compliant with ICH GCP.
- CRO: May maintain TMF on behalf of sponsor but sponsor retains oversight responsibility.
- Clinical Operations: Files trial-related documents, ensures contemporaneous updates.
- QA: Audits TMF/eTMF for compliance and completeness.
- TMF Administrator: Manages indexing, placeholders, user access, and quality checks.
- Investigators: Ensure ISF aligns with sponsor TMF.
Accountability
The sponsor is accountable for TMF/eTMF compliance, regardless of outsourcing. TMF administrators and CROs are accountable for daily management, while QA ensures oversight and audit readiness.
Procedure
1. TMF/eTMF Setup
1.1 At trial initiation, establish a TMF in accordance with ICH E6 (R2/R3) §8 Essential Documents.
1.2 Define TMF structure using recognized models (e.g., DIA TMF Reference Model).
1.3 For eTMF, validate the system in compliance with 21 CFR Part 11 and Annex 11.
1.4 Create TMF/eTMF Index (Annexure-1) reflecting trial phases: before, during, and after the trial.
1.5 Ensure placeholders are created for expected documents, reducing missing documentation risk.
2. Document Classification and Filing
2.1 Classify each document as Essential Before, During, or After trial per ICH GCP.
2.2 Assign document owners responsible for timely filing.
2.3 File documents within 5 working days of finalization.
2.4 Apply version control; superseded versions archived with audit trail.
2.5 Scan and upload paper documents into eTMF if hybrid system used.
3. User Access and Security
3.1 Provide role-based access controls for TMF/eTMF.
3.2 Ensure inspectors have read-only access when required.
3.3 Maintain Access Control Log (Annexure-2).
4. Quality Control and Completeness Checks
4.1 Perform monthly QC checks on 10% of documents across sections.
4.2 Document QC results in TMF QC Log (Annexure-3).
4.3 Rectify discrepancies within 10 working days.
4.4 Perform quarterly completeness reviews using DIA TMF metrics.
5. Version Management and Audit Trails
5.1 Ensure all eTMF documents have audit trails (creation, modification, deletion).
5.2 For paper TMFs, apply dated/stamped superseded labels.
5.3 Maintain TMF Audit Trail Log (Annexure-4).
6. Inspection Readiness
6.1 TMF/eTMF must be inspection-ready at all times.
6.2 Maintain TMF Inspection Checklist (Annexure-5).
6.3 Ensure essential documents (consent, approvals, monitoring reports, IP accountability) are contemporaneous.
6.4 Provide controlled access for regulators within 5 working days of request.
7. Archiving and Migration
7.1 Archive TMF/eTMF at trial closeout in secure, access-controlled facility.
7.2 Retain documents for 15–25 years depending on jurisdiction.
7.3 Document any migration from paper to eTMF or between systems with validation and reconciliation records.
Abbreviations
- SOP: Standard Operating Procedure
- TMF/eTMF: Trial Master File / electronic Trial Master File
- QC: Quality Control
- QA: Quality Assurance
- DIA: Drug Information Association
- PI: Principal Investigator
- ISF: Investigator Site File
Documents
- TMF/eTMF Index (Annexure-1)
- Access Control Log (Annexure-2)
- TMF QC Log (Annexure-3)
- TMF Audit Trail Log (Annexure-4)
- TMF Inspection Checklist (Annexure-5)
References
- ICH E6(R2/R3) – Essential Documents
- FDA – TMF and eTMF Guidance
- EMA – TMF Requirements
- CDSCO – TMF Guidelines
- WHO – TMF Management
Version: 1.0
Approval Section
| Prepared By | Rajesh Kumar, TMF Administrator |
| Checked By | Sunita Reddy, QA Officer |
| Approved By | Dr. Anil Sharma, Head Clinical Quality |
Annexures
Annexure-1: TMF/eTMF Index
| Section | Document Type | Status |
|---|---|---|
| Before Trial | Protocol, IB, Approvals | Filed |
| During Trial | Monitoring reports, IP logs | Filed |
| After Trial | Closeout report, Archival plan | Pending |
Annexure-2: Access Control Log
| User | Role | Access Level | Date Assigned | Date Revoked |
|---|---|---|---|---|
| Meena Sharma | CRA | Read/Write | 01/09/2025 | – |
| Inspector (FDA) | Regulator | Read-only | 15/09/2025 | 20/09/2025 |
Annexure-3: TMF QC Log
| Date | Section | Reviewed By | Findings | Action Taken |
|---|---|---|---|---|
| 10/09/2025 | During Trial | QA Officer | 2 missing CRFs | Filed corrected versions |
Annexure-4: TMF Audit Trail Log
| Date | User | Action | Document | Remarks |
|---|---|---|---|---|
| 12/09/2025 | CRA | Uploaded | Monitoring Report | Validated |
| 13/09/2025 | QA | Corrected | IP Accountability Log | Version 2 |
Annexure-5: TMF Inspection Checklist
| Item | Status | Remarks |
|---|---|---|
| Consent forms filed | Yes | All versions present |
| Monitoring reports complete | Yes | Up to date |
| IP accountability logs | Partial | To be reconciled |
Revision History
| Revision Date | Revision No. | Revision Details | Reason for Revision | Approved By |
|---|---|---|---|---|
| 26/08/2025 | 00 | Initial version | New SOP creation | Head Clinical Quality |
For more SOPs visit: Pharma SOP
